Cluster: HRGMv2_0756_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0756
- CGC Family ID: CGCFAM_00268
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0756_9 | HRGMv2_0756_9_105 | 91814 | 92518 | + | CE4 |
| peptidase | HRGMv2_0756_9 | HRGMv2_0756_9_106 | 92532 | 93797 | + | M16.A15 |
| TC | HRGMv2_0756_9 | HRGMv2_0756_9_107 | 94162 | 97056 | + | 3.A.12.1.1 |
| pfam | HRGMv2_0756_9 | HRGMv2_0756_9_108 | 97075 | 98418 | + | UPF0004 | Radical_SAM | TRAM_2 |
| TC | HRGMv2_0756_9 | HRGMv2_0756_9_109 | 98402 | 98998 | + | 4.F.1.1.8 |
Gene ID: HRGMv2_0756_9_105
Type: CAZyme
Location: 91814 - 92518 (+)
Type: CAZyme
Location: 91814 - 92518 (+)
Gene ID: HRGMv2_0756_9_106
Type: peptidase
Location: 92532 - 93797 (+)
Type: peptidase
Location: 92532 - 93797 (+)
Gene ID: HRGMv2_0756_9_107
Type: TC
Location: 94162 - 97056 (+)
Type: TC
Location: 94162 - 97056 (+)
Gene ID: HRGMv2_0756_9_108
Type: pfam
Location: 97075 - 98418 (+)
Type: pfam
Location: 97075 - 98418 (+)
Gene ID: HRGMv2_0756_9_109
Type: TC
Location: 98402 - 98998 (+)
Type: TC
Location: 98402 - 98998 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-314
Genus
Limihabitans
Species
Limihabitans sp900554285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.