Cluster: HRGMv2_0756_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0756
- CGC Family ID: CGCFAM_03972
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0756_5 | HRGMv2_0756_5_37 | 31627 | 32724 | - | 2.A.7.3.47 |
| pfam | HRGMv2_0756_5 | HRGMv2_0756_5_38 | 33009 | 33665 | + | YhhN |
| CAZyme | HRGMv2_0756_5 | HRGMv2_0756_5_39 | 33998 | 35500 | + | GH77 |
| CAZyme | HRGMv2_0756_5 | HRGMv2_0756_5_40 | 35504 | 37360 | + | CBM48 | GH13_9 |
| CAZyme | HRGMv2_0756_5 | HRGMv2_0756_5_41 | 37384 | 39789 | + | GT35 |
| CAZyme | HRGMv2_0756_5 | HRGMv2_0756_5_42 | 39793 | 41637 | + | GH13_39 |
Gene ID: HRGMv2_0756_5_37
Type: TC
Location: 31627 - 32724 (-)
Type: TC
Location: 31627 - 32724 (-)
Gene ID: HRGMv2_0756_5_38
Type: pfam
Location: 33009 - 33665 (+)
Type: pfam
Location: 33009 - 33665 (+)
Gene ID: HRGMv2_0756_5_39
Type: CAZyme
Location: 33998 - 35500 (+)
Type: CAZyme
Location: 33998 - 35500 (+)
Gene ID: HRGMv2_0756_5_40
Type: CAZyme
Location: 35504 - 37360 (+)
Type: CAZyme
Location: 35504 - 37360 (+)
Gene ID: HRGMv2_0756_5_41
Type: CAZyme
Location: 37384 - 39789 (+)
Type: CAZyme
Location: 37384 - 39789 (+)
Gene ID: HRGMv2_0756_5_42
Type: CAZyme
Location: 39793 - 41637 (+)
Type: CAZyme
Location: 39793 - 41637 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-314
Genus
Limihabitans
Species
Limihabitans sp900554285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.