Cluster: HRGMv2_0755_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0755
- CGC Family ID: CGCFAM_04541
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0755_11 | HRGMv2_0755_11_20 | 22596 | 23027 | + | 3.A.7.19.1 |
| pfam | HRGMv2_0755_11 | HRGMv2_0755_11_21 | 23064 | 23312 | + | Ribosomal_S18 |
| pfam | HRGMv2_0755_11 | HRGMv2_0755_11_22 | 23672 | 24346 | - | Collagen |
| CAZyme | HRGMv2_0755_11 | HRGMv2_0755_11_23 | 24424 | 25518 | + | GT2 |
Gene ID: HRGMv2_0755_11_20
Type: TC
Location: 22596 - 23027 (+)
Type: TC
Location: 22596 - 23027 (+)
Gene ID: HRGMv2_0755_11_21
Type: pfam
Location: 23064 - 23312 (+)
Type: pfam
Location: 23064 - 23312 (+)
Gene ID: HRGMv2_0755_11_22
Type: pfam
Location: 23672 - 24346 (-)
Type: pfam
Location: 23672 - 24346 (-)
Gene ID: HRGMv2_0755_11_23
Type: CAZyme
Location: 24424 - 25518 (+)
Type: CAZyme
Location: 24424 - 25518 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0755_11_20 | vegetarian > vegan | 1.39356 | 0.02605 |
| HRGMv2_0755_11_21 | vegetarian > vegan | 1.55955 | 0.02605 |