Cluster: HRGMv2_0755_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0755
- CGC Family ID: CGCFAM_08211
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0755_5 | HRGMv2_0755_5_11 | 11709 | 12590 | - | 3.A.1.128.6 |
| CAZyme | HRGMv2_0755_5 | HRGMv2_0755_5_12 | 13445 | 14215 | + | CE4 |
| pfam | HRGMv2_0755_5 | HRGMv2_0755_5_13 | 14454 | 15164 | + | SSB |
| NULL(UNKNOWN) | HRGMv2_0755_5 | HRGMv2_0755_5_14 | 15461 | 15574 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0755_5 | HRGMv2_0755_5_15 | 16244 | 17695 | + | 2.A.40.1.2 |
Gene ID: HRGMv2_0755_5_11
Type: TC
Location: 11709 - 12590 (-)
Type: TC
Location: 11709 - 12590 (-)
Gene ID: HRGMv2_0755_5_12
Type: CAZyme
Location: 13445 - 14215 (+)
Type: CAZyme
Location: 13445 - 14215 (+)
Gene ID: HRGMv2_0755_5_13
Type: pfam
Location: 14454 - 15164 (+)
Type: pfam
Location: 14454 - 15164 (+)
Gene ID: HRGMv2_0755_5_14
Type:
Location: 15461 - 15574 (+)
Type:
Location: 15461 - 15574 (+)
Gene ID: HRGMv2_0755_5_15
Type: TC
Location: 16244 - 17695 (+)
Type: TC
Location: 16244 - 17695 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0755_5_11 | vegetarian > vegan | 1.49431 | 0.02605 |