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Cluster: HRGMv2_0755_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0755_36 HRGMv2_0755_36_2 1083 2426 - GH1
CAZyme HRGMv2_0755_36 HRGMv2_0755_36_3 2464 4998 - GH94
CAZyme HRGMv2_0755_36 HRGMv2_0755_36_4 4991 6781 - GH163
CAZyme HRGMv2_0755_36 HRGMv2_0755_36_5 6781 8712 - GH163
NULL(UNKNOWN) HRGMv2_0755_36 HRGMv2_0755_36_6 8709 11534 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0755_36 HRGMv2_0755_36_7 11602 12510 - 3.A.1.1.18
TC HRGMv2_0755_36 HRGMv2_0755_36_8 12529 13593 - 3.A.1.1.45
Gene ID: HRGMv2_0755_36_2
Type: CAZyme
Location: 1083 - 2426 (-)
Gene ID: HRGMv2_0755_36_3
Type: CAZyme
Location: 2464 - 4998 (-)
Gene ID: HRGMv2_0755_36_4
Type: CAZyme
Location: 4991 - 6781 (-)
Gene ID: HRGMv2_0755_36_5
Type: CAZyme
Location: 6781 - 8712 (-)
Gene ID: HRGMv2_0755_36_6
Type:
Location: 8709 - 11534 (-)
Gene ID: HRGMv2_0755_36_7
Type: TC
Location: 11602 - 12510 (-)
Gene ID: HRGMv2_0755_36_8
Type: TC
Location: 12529 - 13593 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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