Cluster: HRGMv2_0755_CGC1
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_0755
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0755_1 | HRGMv2_0755_1_37 | 35712 | 35918 | - | 1.E.18.1.3 |
| NULL(UNKNOWN) | HRGMv2_0755_1 | HRGMv2_0755_1_38 | 36027 | 36413 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0755_1 | HRGMv2_0755_1_39 | 36623 | 37915 | - | GH109 |
| TF | HRGMv2_0755_1 | HRGMv2_0755_1_40 | 38072 | 38959 | + | HTH_AraC |
| CAZyme | HRGMv2_0755_1 | HRGMv2_0755_1_41 | 39112 | 40710 | - | GH20 |
| pfam | HRGMv2_0755_1 | HRGMv2_0755_1_42 | 40860 | 41567 | - | NanE |
| CAZyme | HRGMv2_0755_1 | HRGMv2_0755_1_43 | 41630 | 43645 | - | GH26 |
| CAZyme | HRGMv2_0755_1 | HRGMv2_0755_1_44 | 43688 | 45481 | - | GH26 |
| pfam | HRGMv2_0755_1 | HRGMv2_0755_1_45 | 45493 | 47274 | - | GDPD |
| pfam | HRGMv2_0755_1 | HRGMv2_0755_1_46 | 47285 | 47908 | - | Big_2 | Big_2 |
| CAZyme | HRGMv2_0755_1 | HRGMv2_0755_1_47 | 47921 | 49879 | - | GH31_7 |
| TC | HRGMv2_0755_1 | HRGMv2_0755_1_48 | 49886 | 50806 | - | 3.A.1.1.9 |
| TC | HRGMv2_0755_1 | HRGMv2_0755_1_49 | 50819 | 51886 | - | 3.A.1.1.10 |
Gene ID: HRGMv2_0755_1_37
Type: TC
Location: 35712 - 35918 (-)
Type: TC
Location: 35712 - 35918 (-)
Gene ID: HRGMv2_0755_1_38
Type:
Location: 36027 - 36413 (+)
Type:
Location: 36027 - 36413 (+)
Gene ID: HRGMv2_0755_1_39
Type: CAZyme
Location: 36623 - 37915 (-)
Type: CAZyme
Location: 36623 - 37915 (-)
Gene ID: HRGMv2_0755_1_40
Type: TF
Location: 38072 - 38959 (+)
Type: TF
Location: 38072 - 38959 (+)
Gene ID: HRGMv2_0755_1_41
Type: CAZyme
Location: 39112 - 40710 (-)
Type: CAZyme
Location: 39112 - 40710 (-)
Gene ID: HRGMv2_0755_1_42
Type: pfam
Location: 40860 - 41567 (-)
Type: pfam
Location: 40860 - 41567 (-)
Gene ID: HRGMv2_0755_1_43
Type: CAZyme
Location: 41630 - 43645 (-)
Type: CAZyme
Location: 41630 - 43645 (-)
Gene ID: HRGMv2_0755_1_44
Type: CAZyme
Location: 43688 - 45481 (-)
Type: CAZyme
Location: 43688 - 45481 (-)
Gene ID: HRGMv2_0755_1_45
Type: pfam
Location: 45493 - 47274 (-)
Type: pfam
Location: 45493 - 47274 (-)
Gene ID: HRGMv2_0755_1_46
Type: pfam
Location: 47285 - 47908 (-)
Type: pfam
Location: 47285 - 47908 (-)
Gene ID: HRGMv2_0755_1_47
Type: CAZyme
Location: 47921 - 49879 (-)
Type: CAZyme
Location: 47921 - 49879 (-)
Gene ID: HRGMv2_0755_1_48
Type: TC
Location: 49886 - 50806 (-)
Type: TC
Location: 49886 - 50806 (-)
Gene ID: HRGMv2_0755_1_49
Type: TC
Location: 50819 - 51886 (-)
Type: TC
Location: 50819 - 51886 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.