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Cluster: HRGMv2_0750_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0750_6 HRGMv2_0750_6_8 10019 10918 - 3.A.1.1.6
NULL(UNKNOWN) HRGMv2_0750_6 HRGMv2_0750_6_9 10945 13398 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0750_6 HRGMv2_0750_6_10 13411 15498 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0750_6 HRGMv2_0750_6_11 15531 16478 - 3.A.1.1.7
STP HRGMv2_0750_6 HRGMv2_0750_6_12 16496 17944 - SBP_bac_1
CAZyme HRGMv2_0750_6 HRGMv2_0750_6_13 17950 20172 - GH3
pfam HRGMv2_0750_6 HRGMv2_0750_6_14 20507 21517 + URO-D
CAZyme HRGMv2_0750_6 HRGMv2_0750_6_15 21636 23438 - GH127
CAZyme HRGMv2_0750_6 HRGMv2_0750_6_16 23442 25508 - GH36
Gene ID: HRGMv2_0750_6_8
Type: TC
Location: 10019 - 10918 (-)
Gene ID: HRGMv2_0750_6_9
Type:
Location: 10945 - 13398 (-)
Gene ID: HRGMv2_0750_6_10
Type:
Location: 13411 - 15498 (-)
Gene ID: HRGMv2_0750_6_11
Type: TC
Location: 15531 - 16478 (-)
Gene ID: HRGMv2_0750_6_12
Type: STP
Location: 16496 - 17944 (-)
Gene ID: HRGMv2_0750_6_13
Type: CAZyme
Location: 17950 - 20172 (-)
Gene ID: HRGMv2_0750_6_14
Type: pfam
Location: 20507 - 21517 (+)
Gene ID: HRGMv2_0750_6_15
Type: CAZyme
Location: 21636 - 23438 (-)
Gene ID: HRGMv2_0750_6_16
Type: CAZyme
Location: 23442 - 25508 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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