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Cluster: HRGMv2_0750_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0750_2 HRGMv2_0750_2_187 203614 205263 - GH13_39
CAZyme HRGMv2_0750_2 HRGMv2_0750_2_188 205427 207862 - GT35
CAZyme HRGMv2_0750_2 HRGMv2_0750_2_189 207888 209435 - GT5
pfam HRGMv2_0750_2 HRGMv2_0750_2_190 209478 210581 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_0750_2 HRGMv2_0750_2_191 210584 211762 - NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_0750_2 HRGMv2_0750_2_192 211850 213724 - CBM48 | GH13_9
TC HRGMv2_0750_2 HRGMv2_0750_2_193 214228 215127 - 2.A.115.1.1
Gene ID: HRGMv2_0750_2_187
Type: CAZyme
Location: 203614 - 205263 (-)
Gene ID: HRGMv2_0750_2_188
Type: CAZyme
Location: 205427 - 207862 (-)
Gene ID: HRGMv2_0750_2_189
Type: CAZyme
Location: 207888 - 209435 (-)
Gene ID: HRGMv2_0750_2_190
Type: pfam
Location: 209478 - 210581 (-)
Gene ID: HRGMv2_0750_2_191
Type: pfam
Location: 210584 - 211762 (-)
Gene ID: HRGMv2_0750_2_192
Type: CAZyme
Location: 211850 - 213724 (-)
Gene ID: HRGMv2_0750_2_193
Type: TC
Location: 214228 - 215127 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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