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Cluster: HRGMv2_0750_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0750_28 HRGMv2_0750_28_2 1473 1940 + GH43_32
CAZyme HRGMv2_0750_28 HRGMv2_0750_28_3 1968 2378 + GH43_32
STP HRGMv2_0750_28 HRGMv2_0750_28_4 2618 3955 + SBP_bac_1
TC HRGMv2_0750_28 HRGMv2_0750_28_5 3970 4899 + 3.A.1.1.20
TC HRGMv2_0750_28 HRGMv2_0750_28_6 4910 5821 + 3.A.1.1.11
CAZyme HRGMv2_0750_28 HRGMv2_0750_28_7 5834 8233 + GH32
CAZyme HRGMv2_0750_28 HRGMv2_0750_28_8 8230 10263 + CBM38 | GH32
CAZyme HRGMv2_0750_28 HRGMv2_0750_28_9 10260 12548 + GH32
CAZyme HRGMv2_0750_28 HRGMv2_0750_28_10 12577 15603 + CBM38 | CBM38 | CBM38 | CBM38
Gene ID: HRGMv2_0750_28_2
Type: CAZyme
Location: 1473 - 1940 (+)
Gene ID: HRGMv2_0750_28_3
Type: CAZyme
Location: 1968 - 2378 (+)
Gene ID: HRGMv2_0750_28_4
Type: STP
Location: 2618 - 3955 (+)
Gene ID: HRGMv2_0750_28_5
Type: TC
Location: 3970 - 4899 (+)
Gene ID: HRGMv2_0750_28_6
Type: TC
Location: 4910 - 5821 (+)
Gene ID: HRGMv2_0750_28_7
Type: CAZyme
Location: 5834 - 8233 (+)
Gene ID: HRGMv2_0750_28_8
Type: CAZyme
Location: 8230 - 10263 (+)
Gene ID: HRGMv2_0750_28_9
Type: CAZyme
Location: 10260 - 12548 (+)
Gene ID: HRGMv2_0750_28_10
Type: CAZyme
Location: 12577 - 15603 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0750_28_5 vegetarian > vegan 1.09759 0.04014

🧭 Explore Read Mapping of CGC

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