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Cluster: HRGMv2_0750_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0750_24 HRGMv2_0750_24_10 15682 16554 + 3.A.1.1.28
TC HRGMv2_0750_24 HRGMv2_0750_24_11 16606 17430 + 3.A.1.1.18
CAZyme HRGMv2_0750_24 HRGMv2_0750_24_12 17447 18451 + GH130_2
pfam HRGMv2_0750_24 HRGMv2_0750_24_13 18426 19622 + GlcNAc_2-epim
CAZyme HRGMv2_0750_24 HRGMv2_0750_24_14 19619 20770 + GH130_1
CAZyme HRGMv2_0750_24 HRGMv2_0750_24_15 20772 23135 + CBM27 | GH5_7
CAZyme HRGMv2_0750_24 HRGMv2_0750_24_16 23206 24411 + CE2
Gene ID: HRGMv2_0750_24_10
Type: TC
Location: 15682 - 16554 (+)
Gene ID: HRGMv2_0750_24_11
Type: TC
Location: 16606 - 17430 (+)
Gene ID: HRGMv2_0750_24_12
Type: CAZyme
Location: 17447 - 18451 (+)
Gene ID: HRGMv2_0750_24_13
Type: pfam
Location: 18426 - 19622 (+)
Gene ID: HRGMv2_0750_24_14
Type: CAZyme
Location: 19619 - 20770 (+)
Gene ID: HRGMv2_0750_24_15
Type: CAZyme
Location: 20772 - 23135 (+)
Gene ID: HRGMv2_0750_24_16
Type: CAZyme
Location: 23206 - 24411 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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