Cluster: HRGMv2_0750_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0750
- CGC Family ID: CGCFAM_00824
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0750_11 | HRGMv2_0750_11_74 | 76674 | 77549 | - | 3.A.1.1.29 |
| TC | HRGMv2_0750_11 | HRGMv2_0750_11_75 | 77563 | 79359 | - | 3.A.1.1.10 |
| pfam | HRGMv2_0750_11 | HRGMv2_0750_11_76 | 79379 | 80224 | - | AP_endonuc_2 |
| pfam | HRGMv2_0750_11 | HRGMv2_0750_11_77 | 80228 | 81295 | - | GFO_IDH_MocA | GFO_IDH_MocA_C | KARI_N | GFO_IDH_MocA_C3 |
| CAZyme | HRGMv2_0750_11 | HRGMv2_0750_11_78 | 81307 | 82377 | - | GH179 |
Gene ID: HRGMv2_0750_11_74
Type: TC
Location: 76674 - 77549 (-)
Type: TC
Location: 76674 - 77549 (-)
Gene ID: HRGMv2_0750_11_75
Type: TC
Location: 77563 - 79359 (-)
Type: TC
Location: 77563 - 79359 (-)
Gene ID: HRGMv2_0750_11_76
Type: pfam
Location: 79379 - 80224 (-)
Type: pfam
Location: 79379 - 80224 (-)
Gene ID: HRGMv2_0750_11_77
Type: pfam
Location: 80228 - 81295 (-)
Type: pfam
Location: 80228 - 81295 (-)
Gene ID: HRGMv2_0750_11_78
Type: CAZyme
Location: 81307 - 82377 (-)
Type: CAZyme
Location: 81307 - 82377 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia sp904373255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.