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Cluster: HRGMv2_0747_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0747_10 HRGMv2_0747_10_22 30673 32007 + CE2
NULL(UNKNOWN) HRGMv2_0747_10 HRGMv2_0747_10_23 32065 34680 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0747_10 HRGMv2_0747_10_24 34799 36616 + Flg_new | Flg_new
CAZyme HRGMv2_0747_10 HRGMv2_0747_10_25 36627 38630 + GH97
STP HRGMv2_0747_10 HRGMv2_0747_10_26 38800 40257 + SBP_bac_1
TC HRGMv2_0747_10 HRGMv2_0747_10_27 40259 41284 + 3.A.1.1.20
TC HRGMv2_0747_10 HRGMv2_0747_10_28 41277 42191 + 3.A.1.1.36
TC HRGMv2_0747_10 HRGMv2_0747_10_29 42201 43964 + 3.A.1.1.26
TF HRGMv2_0747_10 HRGMv2_0747_10_30 43961 44941 + LacI
CAZyme HRGMv2_0747_10 HRGMv2_0747_10_31 44982 46586 + GH20
CAZyme HRGMv2_0747_10 HRGMv2_0747_10_32 46674 47585 + GH43_32
Gene ID: HRGMv2_0747_10_22
Type: CAZyme
Location: 30673 - 32007 (+)
Gene ID: HRGMv2_0747_10_23
Type:
Location: 32065 - 34680 (+)
Gene ID: HRGMv2_0747_10_24
Type: pfam
Location: 34799 - 36616 (+)
Gene ID: HRGMv2_0747_10_25
Type: CAZyme
Location: 36627 - 38630 (+)
Gene ID: HRGMv2_0747_10_26
Type: STP
Location: 38800 - 40257 (+)
Gene ID: HRGMv2_0747_10_27
Type: TC
Location: 40259 - 41284 (+)
Gene ID: HRGMv2_0747_10_28
Type: TC
Location: 41277 - 42191 (+)
Gene ID: HRGMv2_0747_10_29
Type: TC
Location: 42201 - 43964 (+)
Gene ID: HRGMv2_0747_10_30
Type: TF
Location: 43961 - 44941 (+)
Gene ID: HRGMv2_0747_10_31
Type: CAZyme
Location: 44982 - 46586 (+)
Gene ID: HRGMv2_0747_10_32
Type: CAZyme
Location: 46674 - 47585 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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