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Cluster: HRGMv2_0747_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0747_7 HRGMv2_0747_7_1 79 1680 - GH20
NULL(UNKNOWN) HRGMv2_0747_7 HRGMv2_0747_7_2 2161 2721 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0747_7 HRGMv2_0747_7_3 2734 3264 + DUF2764
TC HRGMv2_0747_7 HRGMv2_0747_7_4 3269 5008 + 3.A.2.3.3
TC HRGMv2_0747_7 HRGMv2_0747_7_5 5010 6305 + 3.A.2.3.3
TC HRGMv2_0747_7 HRGMv2_0747_7_6 6318 6935 + 3.A.2.3.3
TC HRGMv2_0747_7 HRGMv2_0747_7_7 6932 8743 + 3.A.2.3.3
TC HRGMv2_0747_7 HRGMv2_0747_7_8 8774 9211 + 3.A.2.3.3
TF HRGMv2_0747_7 HRGMv2_0747_7_9 9315 10271 - HTH_5
pfam HRGMv2_0747_7 HRGMv2_0747_7_10 10419 11423 + EamA
CAZyme HRGMv2_0747_7 HRGMv2_0747_7_11 11443 13173 + GH2
pfam HRGMv2_0747_7 HRGMv2_0747_7_12 13203 14144 + BPD_transp_1
TC HRGMv2_0747_7 HRGMv2_0747_7_13 14156 15031 + 3.A.1.1.18
Gene ID: HRGMv2_0747_7_1
Type: CAZyme
Location: 79 - 1680 (-)
Gene ID: HRGMv2_0747_7_2
Type:
Location: 2161 - 2721 (+)
Gene ID: HRGMv2_0747_7_3
Type: pfam
Location: 2734 - 3264 (+)
Gene ID: HRGMv2_0747_7_4
Type: TC
Location: 3269 - 5008 (+)
Gene ID: HRGMv2_0747_7_5
Type: TC
Location: 5010 - 6305 (+)
Gene ID: HRGMv2_0747_7_6
Type: TC
Location: 6318 - 6935 (+)
Gene ID: HRGMv2_0747_7_7
Type: TC
Location: 6932 - 8743 (+)
Gene ID: HRGMv2_0747_7_8
Type: TC
Location: 8774 - 9211 (+)
Gene ID: HRGMv2_0747_7_9
Type: TF
Location: 9315 - 10271 (-)
Gene ID: HRGMv2_0747_7_10
Type: pfam
Location: 10419 - 11423 (+)
Gene ID: HRGMv2_0747_7_11
Type: CAZyme
Location: 11443 - 13173 (+)
Gene ID: HRGMv2_0747_7_12
Type: pfam
Location: 13203 - 14144 (+)
Gene ID: HRGMv2_0747_7_13
Type: TC
Location: 14156 - 15031 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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