Cluster: HRGMv2_0747_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0747
- CGC Family ID: CGCFAM_02878
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0747_3 | HRGMv2_0747_3_3 | 2180 | 3427 | + | 3.A.1.1.2 |
| TC | HRGMv2_0747_3 | HRGMv2_0747_3_4 | 3441 | 4355 | + | 3.A.1.1.11 |
| TC | HRGMv2_0747_3 | HRGMv2_0747_3_5 | 4352 | 5230 | + | 3.A.1.1.34 |
| CAZyme | HRGMv2_0747_3 | HRGMv2_0747_3_6 | 5234 | 6700 | + | GH30_3 |
| NULL(UNKNOWN) | HRGMv2_0747_3 | HRGMv2_0747_3_7 | 6713 | 8059 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0747_3 | HRGMv2_0747_3_8 | 8072 | 9409 | + | GH30_1 |
Gene ID: HRGMv2_0747_3_3
Type: TC
Location: 2180 - 3427 (+)
Type: TC
Location: 2180 - 3427 (+)
Gene ID: HRGMv2_0747_3_4
Type: TC
Location: 3441 - 4355 (+)
Type: TC
Location: 3441 - 4355 (+)
Gene ID: HRGMv2_0747_3_5
Type: TC
Location: 4352 - 5230 (+)
Type: TC
Location: 4352 - 5230 (+)
Gene ID: HRGMv2_0747_3_6
Type: CAZyme
Location: 5234 - 6700 (+)
Type: CAZyme
Location: 5234 - 6700 (+)
Gene ID: HRGMv2_0747_3_7
Type:
Location: 6713 - 8059 (+)
Type:
Location: 6713 - 8059 (+)
Gene ID: HRGMv2_0747_3_8
Type: CAZyme
Location: 8072 - 9409 (+)
Type: CAZyme
Location: 8072 - 9409 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia faecipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.