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Cluster: HRGMv2_0747_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0747_1 HRGMv2_0747_1_72 72732 73634 - 9.B.70.1.1
pfam HRGMv2_0747_1 HRGMv2_0747_1_73 73766 74488 - SMC_ScpB
pfam HRGMv2_0747_1 HRGMv2_0747_1_74 74463 75254 - SMC_ScpA
TC HRGMv2_0747_1 HRGMv2_0747_1_75 75255 75962 - 9.B.149.1.11
pfam HRGMv2_0747_1 HRGMv2_0747_1_76 76094 77419 - Orn_DAP_Arg_deC | Orn_Arg_deC_N
CAZyme HRGMv2_0747_1 HRGMv2_0747_1_77 77570 80434 - GH2
pfam HRGMv2_0747_1 HRGMv2_0747_1_78 80535 81599 - Peptidase_S9 | Abhydrolase_1 | DLH | Hydrolase_4 | Abhydrolase_6
peptidase HRGMv2_0747_1 HRGMv2_0747_1_79 81735 82613 + C40.UPW
TC HRGMv2_0747_1 HRGMv2_0747_1_80 82825 84165 + 9.A.40.2.4
Gene ID: HRGMv2_0747_1_72
Type: TC
Location: 72732 - 73634 (-)
Gene ID: HRGMv2_0747_1_73
Type: pfam
Location: 73766 - 74488 (-)
Gene ID: HRGMv2_0747_1_74
Type: pfam
Location: 74463 - 75254 (-)
Gene ID: HRGMv2_0747_1_75
Type: TC
Location: 75255 - 75962 (-)
Gene ID: HRGMv2_0747_1_76
Type: pfam
Location: 76094 - 77419 (-)
Gene ID: HRGMv2_0747_1_77
Type: CAZyme
Location: 77570 - 80434 (-)
Gene ID: HRGMv2_0747_1_78
Type: pfam
Location: 80535 - 81599 (-)
Gene ID: HRGMv2_0747_1_79
Type: peptidase
Location: 81735 - 82613 (+)
Gene ID: HRGMv2_0747_1_80
Type: TC
Location: 82825 - 84165 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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