Cluster: HRGMv2_0747_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0747
- CGC Family ID: CGCFAM_00906
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0747_52 | HRGMv2_0747_52_1 | 3 | 722 | + | 3.A.3.2.21 |
| TF | HRGMv2_0747_52 | HRGMv2_0747_52_2 | 802 | 1593 | - | HTH_AraC |
| CAZyme | HRGMv2_0747_52 | HRGMv2_0747_52_3 | 1701 | 2759 | + | GH179 |
| pfam | HRGMv2_0747_52 | HRGMv2_0747_52_4 | 2788 | 3759 | + | AP_endonuc_2 |
| pfam | HRGMv2_0747_52 | HRGMv2_0747_52_5 | 3769 | 4497 | + | AP_endonuc_2 |
| CAZyme | HRGMv2_0747_52 | HRGMv2_0747_52_6 | 4511 | 5596 | + | GH179 |
Gene ID: HRGMv2_0747_52_1
Type: TC
Location: 3 - 722 (+)
Type: TC
Location: 3 - 722 (+)
Gene ID: HRGMv2_0747_52_2
Type: TF
Location: 802 - 1593 (-)
Type: TF
Location: 802 - 1593 (-)
Gene ID: HRGMv2_0747_52_3
Type: CAZyme
Location: 1701 - 2759 (+)
Type: CAZyme
Location: 1701 - 2759 (+)
Gene ID: HRGMv2_0747_52_4
Type: pfam
Location: 2788 - 3759 (+)
Type: pfam
Location: 2788 - 3759 (+)
Gene ID: HRGMv2_0747_52_5
Type: pfam
Location: 3769 - 4497 (+)
Type: pfam
Location: 3769 - 4497 (+)
Gene ID: HRGMv2_0747_52_6
Type: CAZyme
Location: 4511 - 5596 (+)
Type: CAZyme
Location: 4511 - 5596 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia faecipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.