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Cluster: HRGMv2_0747_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0747_22 HRGMv2_0747_22_1 95 2257 - GH112
TF HRGMv2_0747_22 HRGMv2_0747_22_2 2308 3138 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_0747_22 HRGMv2_0747_22_3 3187 5337 - GH3
NULL(UNKNOWN) HRGMv2_0747_22 HRGMv2_0747_22_4 5371 6525 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0747_22 HRGMv2_0747_22_5 6582 9086 - Big_2 | Big_2
CAZyme HRGMv2_0747_22 HRGMv2_0747_22_6 9098 10900 - GH163
pfam HRGMv2_0747_22 HRGMv2_0747_22_7 10921 15024 - Big_3_2
TC HRGMv2_0747_22 HRGMv2_0747_22_8 15028 15912 - 3.A.1.1.34
Gene ID: HRGMv2_0747_22_1
Type: CAZyme
Location: 95 - 2257 (-)
Gene ID: HRGMv2_0747_22_2
Type: TF
Location: 2308 - 3138 (-)
Gene ID: HRGMv2_0747_22_3
Type: CAZyme
Location: 3187 - 5337 (-)
Gene ID: HRGMv2_0747_22_4
Type:
Location: 5371 - 6525 (-)
Gene ID: HRGMv2_0747_22_5
Type: pfam
Location: 6582 - 9086 (-)
Gene ID: HRGMv2_0747_22_6
Type: CAZyme
Location: 9098 - 10900 (-)
Gene ID: HRGMv2_0747_22_7
Type: pfam
Location: 10921 - 15024 (-)
Gene ID: HRGMv2_0747_22_8
Type: TC
Location: 15028 - 15912 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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