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Cluster: HRGMv2_0747_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0747_15 HRGMv2_0747_15_5 4929 8057 - CBM38 | CBM38 | CBM38 | CBM38
CAZyme HRGMv2_0747_15 HRGMv2_0747_15_6 8086 10374 - GH32
CAZyme HRGMv2_0747_15 HRGMv2_0747_15_7 10371 12404 - CBM38 | GH32
CAZyme HRGMv2_0747_15 HRGMv2_0747_15_8 12401 14800 - GH32
TC HRGMv2_0747_15 HRGMv2_0747_15_9 14813 15724 - 3.A.1.1.11
TC HRGMv2_0747_15 HRGMv2_0747_15_10 15735 16664 - 3.A.1.1.20
STP HRGMv2_0747_15 HRGMv2_0747_15_11 16679 18016 - SBP_bac_1
CAZyme HRGMv2_0747_15 HRGMv2_0747_15_12 18256 18666 - GH43_32
CAZyme HRGMv2_0747_15 HRGMv2_0747_15_13 18694 19161 - GH43_32
Gene ID: HRGMv2_0747_15_5
Type: CAZyme
Location: 4929 - 8057 (-)
Gene ID: HRGMv2_0747_15_6
Type: CAZyme
Location: 8086 - 10374 (-)
Gene ID: HRGMv2_0747_15_7
Type: CAZyme
Location: 10371 - 12404 (-)
Gene ID: HRGMv2_0747_15_8
Type: CAZyme
Location: 12401 - 14800 (-)
Gene ID: HRGMv2_0747_15_9
Type: TC
Location: 14813 - 15724 (-)
Gene ID: HRGMv2_0747_15_10
Type: TC
Location: 15735 - 16664 (-)
Gene ID: HRGMv2_0747_15_11
Type: STP
Location: 16679 - 18016 (-)
Gene ID: HRGMv2_0747_15_12
Type: CAZyme
Location: 18256 - 18666 (-)
Gene ID: HRGMv2_0747_15_13
Type: CAZyme
Location: 18694 - 19161 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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