Cluster: HRGMv2_0744_CGC8
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0744
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0744_1 | HRGMv2_0744_1_541 | 640385 | 641164 | - | 3.D.10.1.4 |
| pfam | HRGMv2_0744_1 | HRGMv2_0744_1_542 | 641195 | 642571 | - | Lyase_1 | FumaraseC_C |
| pfam | HRGMv2_0744_1 | HRGMv2_0744_1_543 | 642594 | 643544 | - | Ldh_1_N | Ldh_1_C |
| TC | HRGMv2_0744_1 | HRGMv2_0744_1_544 | 643859 | 645535 | - | 3.A.1.121.4 |
| pfam | HRGMv2_0744_1 | HRGMv2_0744_1_545 | 645525 | 646010 | - | DUF308 | DUF308 | DUF308 |
| pfam | HRGMv2_0744_1 | HRGMv2_0744_1_546 | 646084 | 648462 | - | FtsX | FtsX |
| TC | HRGMv2_0744_1 | HRGMv2_0744_1_547 | 648459 | 649154 | - | 3.A.1.122.14 |
| NULL(UNKNOWN) | HRGMv2_0744_1 | HRGMv2_0744_1_548 | 649388 | 649582 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0744_1 | HRGMv2_0744_1_549 | 649599 | 650567 | - | GT2 |
Gene ID: HRGMv2_0744_1_541
Type: TC
Location: 640385 - 641164 (-)
Type: TC
Location: 640385 - 641164 (-)
Gene ID: HRGMv2_0744_1_542
Type: pfam
Location: 641195 - 642571 (-)
Type: pfam
Location: 641195 - 642571 (-)
Gene ID: HRGMv2_0744_1_543
Type: pfam
Location: 642594 - 643544 (-)
Type: pfam
Location: 642594 - 643544 (-)
Gene ID: HRGMv2_0744_1_544
Type: TC
Location: 643859 - 645535 (-)
Type: TC
Location: 643859 - 645535 (-)
Gene ID: HRGMv2_0744_1_545
Type: pfam
Location: 645525 - 646010 (-)
Type: pfam
Location: 645525 - 646010 (-)
Gene ID: HRGMv2_0744_1_546
Type: pfam
Location: 646084 - 648462 (-)
Type: pfam
Location: 646084 - 648462 (-)
Gene ID: HRGMv2_0744_1_547
Type: TC
Location: 648459 - 649154 (-)
Type: TC
Location: 648459 - 649154 (-)
Gene ID: HRGMv2_0744_1_548
Type:
Location: 649388 - 649582 (-)
Type:
Location: 649388 - 649582 (-)
Gene ID: HRGMv2_0744_1_549
Type: CAZyme
Location: 649599 - 650567 (-)
Type: CAZyme
Location: 649599 - 650567 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma sp900555925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0744_1_542 | vegetarian > vegan | 1.11229 | 0.00894 |
| HRGMv2_0744_1_545 | vegetarian > omnivore | 1.06264 | 0.02100 |
| HRGMv2_0744_1_546 | vegan > omnivore | 1.31273 | 0.03539 |
| HRGMv2_0744_1_546 | vegetarian > omnivore | 1.01489 | 0.02100 |
| HRGMv2_0744_1_547 | vegan > omnivore | 1.13675 | 0.03539 |
| HRGMv2_0744_1_547 | vegetarian > omnivore | 1.62465 | 0.02100 |