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Cluster: HRGMv2_0744_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0744_1 HRGMv2_0744_1_435 512629 513912 - GH10
pfam HRGMv2_0744_1 HRGMv2_0744_1_436 513969 515282 - MR_MLE_N | MR_MLE_C
CAZyme HRGMv2_0744_1 HRGMv2_0744_1_437 515385 516740 - GH1
TF HRGMv2_0744_1 HRGMv2_0744_1_438 516909 517730 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_0744_1 HRGMv2_0744_1_439 517746 518654 - GH43_32
CAZyme HRGMv2_0744_1 HRGMv2_0744_1_440 518691 521261 - GH38
NULL(UNKNOWN) HRGMv2_0744_1 HRGMv2_0744_1_441 521381 523726 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0744_1 HRGMv2_0744_1_442 523739 525718 - GH43_33
TC HRGMv2_0744_1 HRGMv2_0744_1_443 525757 526659 - 3.A.1.1.48
TC HRGMv2_0744_1 HRGMv2_0744_1_444 526652 527620 - 3.A.1.1.3
Gene ID: HRGMv2_0744_1_435
Type: CAZyme
Location: 512629 - 513912 (-)
Gene ID: HRGMv2_0744_1_436
Type: pfam
Location: 513969 - 515282 (-)
Gene ID: HRGMv2_0744_1_437
Type: CAZyme
Location: 515385 - 516740 (-)
Gene ID: HRGMv2_0744_1_438
Type: TF
Location: 516909 - 517730 (+)
Gene ID: HRGMv2_0744_1_439
Type: CAZyme
Location: 517746 - 518654 (-)
Gene ID: HRGMv2_0744_1_440
Type: CAZyme
Location: 518691 - 521261 (-)
Gene ID: HRGMv2_0744_1_441
Type:
Location: 521381 - 523726 (-)
Gene ID: HRGMv2_0744_1_442
Type: CAZyme
Location: 523739 - 525718 (-)
Gene ID: HRGMv2_0744_1_443
Type: TC
Location: 525757 - 526659 (-)
Gene ID: HRGMv2_0744_1_444
Type: TC
Location: 526652 - 527620 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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