Cluster: HRGMv2_0744_CGC3
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_0744
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0744_1 | HRGMv2_0744_1_100 | 120036 | 122066 | + | CBM4 | CBM4 |
| CAZyme | HRGMv2_0744_1 | HRGMv2_0744_1_101 | 122096 | 123229 | + | GH43_3 |
| pfam | HRGMv2_0744_1 | HRGMv2_0744_1_102 | 123319 | 124620 | + | SBP_bac_8 |
| TC | HRGMv2_0744_1 | HRGMv2_0744_1_103 | 124649 | 125563 | + | 3.A.1.1.4 |
| TC | HRGMv2_0744_1 | HRGMv2_0744_1_104 | 125565 | 126431 | + | 3.A.1.1.36 |
| CAZyme | HRGMv2_0744_1 | HRGMv2_0744_1_105 | 126462 | 127352 | + | GH43_33 |
| CAZyme | HRGMv2_0744_1 | HRGMv2_0744_1_106 | 127397 | 128476 | + | GH43_3 |
| CAZyme | HRGMv2_0744_1 | HRGMv2_0744_1_107 | 128943 | 130442 | + | GH84 |
| CAZyme | HRGMv2_0744_1 | HRGMv2_0744_1_108 | 130758 | 133688 | + | GH38 |
Gene ID: HRGMv2_0744_1_100
Type: CAZyme
Location: 120036 - 122066 (+)
Type: CAZyme
Location: 120036 - 122066 (+)
Gene ID: HRGMv2_0744_1_101
Type: CAZyme
Location: 122096 - 123229 (+)
Type: CAZyme
Location: 122096 - 123229 (+)
Gene ID: HRGMv2_0744_1_102
Type: pfam
Location: 123319 - 124620 (+)
Type: pfam
Location: 123319 - 124620 (+)
Gene ID: HRGMv2_0744_1_103
Type: TC
Location: 124649 - 125563 (+)
Type: TC
Location: 124649 - 125563 (+)
Gene ID: HRGMv2_0744_1_104
Type: TC
Location: 125565 - 126431 (+)
Type: TC
Location: 125565 - 126431 (+)
Gene ID: HRGMv2_0744_1_105
Type: CAZyme
Location: 126462 - 127352 (+)
Type: CAZyme
Location: 126462 - 127352 (+)
Gene ID: HRGMv2_0744_1_106
Type: CAZyme
Location: 127397 - 128476 (+)
Type: CAZyme
Location: 127397 - 128476 (+)
Gene ID: HRGMv2_0744_1_107
Type: CAZyme
Location: 128943 - 130442 (+)
Type: CAZyme
Location: 128943 - 130442 (+)
Gene ID: HRGMv2_0744_1_108
Type: CAZyme
Location: 130758 - 133688 (+)
Type: CAZyme
Location: 130758 - 133688 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma sp900555925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0744_1_101 | vegan > omnivore | 1.04667 | 0.03539 |
| HRGMv2_0744_1_102 | vegan > omnivore | 1.28662 | 0.03539 |
| HRGMv2_0744_1_103 | vegetarian > omnivore | 1.58307 | 0.02100 |
| HRGMv2_0744_1_103 | vegetarian > vegan | 1.08324 | 0.00894 |
| HRGMv2_0744_1_106 | vegan > omnivore | 1.14662 | 0.03539 |
| HRGMv2_0744_1_107 | vegan > omnivore | 1.59342 | 0.03539 |