Cluster: HRGMv2_0744_CGC26
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate: fructan
- Genome ID: HRGMv2_0744
- CGC Family ID: CGCFAM_00035
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0744_8 | HRGMv2_0744_8_36 | 48943 | 50391 | - | GH32 |
| TF | HRGMv2_0744_8 | HRGMv2_0744_8_37 | 50666 | 51655 | + | LacI |
| TC | HRGMv2_0744_8 | HRGMv2_0744_8_38 | 51752 | 53590 | - | 3.A.1.135.9 |
| TC | HRGMv2_0744_8 | HRGMv2_0744_8_39 | 53594 | 55330 | - | 3.A.1.135.9 |
| TF | HRGMv2_0744_8 | HRGMv2_0744_8_40 | 55493 | 55966 | - | MarR |
| TC | HRGMv2_0744_8 | HRGMv2_0744_8_41 | 56142 | 57050 | - | 3.A.1.1.29 |
| TC | HRGMv2_0744_8 | HRGMv2_0744_8_42 | 57064 | 58059 | - | 3.A.1.1.10 |
Gene ID: HRGMv2_0744_8_36
Type: CAZyme
Location: 48943 - 50391 (-)
Type: CAZyme
Location: 48943 - 50391 (-)
Gene ID: HRGMv2_0744_8_37
Type: TF
Location: 50666 - 51655 (+)
Type: TF
Location: 50666 - 51655 (+)
Gene ID: HRGMv2_0744_8_38
Type: TC
Location: 51752 - 53590 (-)
Type: TC
Location: 51752 - 53590 (-)
Gene ID: HRGMv2_0744_8_39
Type: TC
Location: 53594 - 55330 (-)
Type: TC
Location: 53594 - 55330 (-)
Gene ID: HRGMv2_0744_8_40
Type: TF
Location: 55493 - 55966 (-)
Type: TF
Location: 55493 - 55966 (-)
Gene ID: HRGMv2_0744_8_41
Type: TC
Location: 56142 - 57050 (-)
Type: TC
Location: 56142 - 57050 (-)
Gene ID: HRGMv2_0744_8_42
Type: TC
Location: 57064 - 58059 (-)
Type: TC
Location: 57064 - 58059 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma sp900555925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0744_8_36 | vegetarian > vegan | 1.56210 | 0.00894 |
| HRGMv2_0744_8_40 | vegetarian > vegan | 2.27384 | 0.00894 |
| HRGMv2_0744_8_41 | vegetarian > vegan | 1.62492 | 0.00894 |
| HRGMv2_0744_8_42 | vegetarian > omnivore | 1.25713 | 0.02100 |
| HRGMv2_0744_8_42 | vegetarian > vegan | 3.89439 | 0.00894 |