Cluster: HRGMv2_0744_CGC24
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0744
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0744_7 | HRGMv2_0744_7_110 | 133190 | 135391 | + | CBM20 | GH13_2 |
| TF | HRGMv2_0744_7 | HRGMv2_0744_7_111 | 135429 | 136544 | - | LacI | LacI |
| NULL(UNKNOWN) | HRGMv2_0744_7 | HRGMv2_0744_7_112 | 136737 | 138446 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0744_7 | HRGMv2_0744_7_113 | 138504 | 140177 | + | CBM34 | GH13_20 |
| pfam | HRGMv2_0744_7 | HRGMv2_0744_7_114 | 140164 | 141651 | + | SBP_bac_1 | SBP_bac_8 |
| TC | HRGMv2_0744_7 | HRGMv2_0744_7_115 | 141669 | 143006 | + | 3.A.1.1.27 |
| TC | HRGMv2_0744_7 | HRGMv2_0744_7_116 | 143003 | 143863 | + | 3.A.1.1.27 |
| CAZyme | HRGMv2_0744_7 | HRGMv2_0744_7_117 | 143866 | 146115 | + | GT35 |
| CAZyme | HRGMv2_0744_7 | HRGMv2_0744_7_118 | 146211 | 147653 | + | GH77 |
Gene ID: HRGMv2_0744_7_110
Type: CAZyme
Location: 133190 - 135391 (+)
Type: CAZyme
Location: 133190 - 135391 (+)
Gene ID: HRGMv2_0744_7_111
Type: TF
Location: 135429 - 136544 (-)
Type: TF
Location: 135429 - 136544 (-)
Gene ID: HRGMv2_0744_7_112
Type:
Location: 136737 - 138446 (+)
Type:
Location: 136737 - 138446 (+)
Gene ID: HRGMv2_0744_7_113
Type: CAZyme
Location: 138504 - 140177 (+)
Type: CAZyme
Location: 138504 - 140177 (+)
Gene ID: HRGMv2_0744_7_114
Type: pfam
Location: 140164 - 141651 (+)
Type: pfam
Location: 140164 - 141651 (+)
Gene ID: HRGMv2_0744_7_115
Type: TC
Location: 141669 - 143006 (+)
Type: TC
Location: 141669 - 143006 (+)
Gene ID: HRGMv2_0744_7_116
Type: TC
Location: 143003 - 143863 (+)
Type: TC
Location: 143003 - 143863 (+)
Gene ID: HRGMv2_0744_7_117
Type: CAZyme
Location: 143866 - 146115 (+)
Type: CAZyme
Location: 143866 - 146115 (+)
Gene ID: HRGMv2_0744_7_118
Type: CAZyme
Location: 146211 - 147653 (+)
Type: CAZyme
Location: 146211 - 147653 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma sp900555925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0744_7_110 | vegan > omnivore | 1.26588 | 0.03539 |
| HRGMv2_0744_7_110 | vegetarian > omnivore | 1.60120 | 0.02100 |
| HRGMv2_0744_7_111 | vegetarian > omnivore | 2.14224 | 0.02100 |
| HRGMv2_0744_7_111 | vegetarian > vegan | 1.28681 | 0.00894 |
| HRGMv2_0744_7_114 | vegetarian > vegan | 1.31711 | 0.00894 |
| HRGMv2_0744_7_115 | vegetarian > omnivore | 1.67898 | 0.02100 |
| HRGMv2_0744_7_115 | vegetarian > vegan | 2.60892 | 0.00894 |
| HRGMv2_0744_7_116 | vegetarian > omnivore | 1.54187 | 0.02100 |
| HRGMv2_0744_7_116 | vegetarian > vegan | 1.59410 | 0.00894 |
| HRGMv2_0744_7_117 | vegetarian > vegan | 1.01442 | 0.00894 |
| HRGMv2_0744_7_118 | vegan > omnivore | 2.22662 | 0.03539 |
| HRGMv2_0744_7_118 | vegetarian > omnivore | 2.42590 | 0.02100 |