Cluster: HRGMv2_0744_CGC19
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0744
- CGC Family ID: CGCFAM_02160
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0744_6 | HRGMv2_0744_6_22 | 29368 | 31002 | - | 2.A.58.2.2 |
| pfam | HRGMv2_0744_6 | HRGMv2_0744_6_23 | 31171 | 31827 | - | PhoU | PhoU |
| TC | HRGMv2_0744_6 | HRGMv2_0744_6_24 | 31832 | 32617 | - | 3.A.1.7.5 |
| TC | HRGMv2_0744_6 | HRGMv2_0744_6_25 | 32640 | 34379 | - | 3.A.1.7.5 |
| STP | HRGMv2_0744_6 | HRGMv2_0744_6_26 | 34404 | 35264 | - | LysR_substrate |
| CAZyme | HRGMv2_0744_6 | HRGMv2_0744_6_27 | 36031 | 37761 | - | GH2 |
| CAZyme | HRGMv2_0744_6 | HRGMv2_0744_6_28 | 37810 | 40230 | - | GH43_32 |
| CAZyme | HRGMv2_0744_6 | HRGMv2_0744_6_29 | 40327 | 42828 | - | CBM66 | GH43_32 |
| pfam | HRGMv2_0744_6 | HRGMv2_0744_6_30 | 42848 | 46624 | - | CarboxypepD_reg | CarboxypepD_reg | CarboxypepD_reg | CarboxypepD_reg | CarbopepD_reg_2 |
| TC | HRGMv2_0744_6 | HRGMv2_0744_6_31 | 46670 | 47542 | - | 3.A.1.1.11 |
| TC | HRGMv2_0744_6 | HRGMv2_0744_6_32 | 47548 | 48438 | - | 3.A.1.1.34 |
Gene ID: HRGMv2_0744_6_22
Type: TC
Location: 29368 - 31002 (-)
Type: TC
Location: 29368 - 31002 (-)
Gene ID: HRGMv2_0744_6_23
Type: pfam
Location: 31171 - 31827 (-)
Type: pfam
Location: 31171 - 31827 (-)
Gene ID: HRGMv2_0744_6_24
Type: TC
Location: 31832 - 32617 (-)
Type: TC
Location: 31832 - 32617 (-)
Gene ID: HRGMv2_0744_6_25
Type: TC
Location: 32640 - 34379 (-)
Type: TC
Location: 32640 - 34379 (-)
Gene ID: HRGMv2_0744_6_26
Type: STP
Location: 34404 - 35264 (-)
Type: STP
Location: 34404 - 35264 (-)
Gene ID: HRGMv2_0744_6_27
Type: CAZyme
Location: 36031 - 37761 (-)
Type: CAZyme
Location: 36031 - 37761 (-)
Gene ID: HRGMv2_0744_6_28
Type: CAZyme
Location: 37810 - 40230 (-)
Type: CAZyme
Location: 37810 - 40230 (-)
Gene ID: HRGMv2_0744_6_29
Type: CAZyme
Location: 40327 - 42828 (-)
Type: CAZyme
Location: 40327 - 42828 (-)
Gene ID: HRGMv2_0744_6_30
Type: pfam
Location: 42848 - 46624 (-)
Type: pfam
Location: 42848 - 46624 (-)
Gene ID: HRGMv2_0744_6_31
Type: TC
Location: 46670 - 47542 (-)
Type: TC
Location: 46670 - 47542 (-)
Gene ID: HRGMv2_0744_6_32
Type: TC
Location: 47548 - 48438 (-)
Type: TC
Location: 47548 - 48438 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma sp900555925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0744_6_22 | vegetarian > omnivore | 1.09421 | 0.02100 |
| HRGMv2_0744_6_27 | vegetarian > omnivore | 1.00925 | 0.02100 |
| HRGMv2_0744_6_28 | vegan > omnivore | 1.12969 | 0.03539 |
| HRGMv2_0744_6_28 | vegetarian > omnivore | 1.10468 | 0.02100 |