Cluster: HRGMv2_0744_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0744
- CGC Family ID: CGCFAM_00448
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0744_5 | HRGMv2_0744_5_179 | 186350 | 187345 | + | 3.A.1.1.10 |
| TC | HRGMv2_0744_5 | HRGMv2_0744_5_180 | 187357 | 188292 | + | 3.A.1.1.10 |
| CAZyme | HRGMv2_0744_5 | HRGMv2_0744_5_181 | 188342 | 190039 | + | GH28 |
| CAZyme | HRGMv2_0744_5 | HRGMv2_0744_5_182 | 190072 | 191790 | + | GH28 |
| CAZyme | HRGMv2_0744_5 | HRGMv2_0744_5_183 | 191803 | 193461 | + | GH28 |
| CAZyme | HRGMv2_0744_5 | HRGMv2_0744_5_184 | 193500 | 195644 | + | GH36 |
Gene ID: HRGMv2_0744_5_179
Type: TC
Location: 186350 - 187345 (+)
Type: TC
Location: 186350 - 187345 (+)
Gene ID: HRGMv2_0744_5_180
Type: TC
Location: 187357 - 188292 (+)
Type: TC
Location: 187357 - 188292 (+)
Gene ID: HRGMv2_0744_5_181
Type: CAZyme
Location: 188342 - 190039 (+)
Type: CAZyme
Location: 188342 - 190039 (+)
Gene ID: HRGMv2_0744_5_182
Type: CAZyme
Location: 190072 - 191790 (+)
Type: CAZyme
Location: 190072 - 191790 (+)
Gene ID: HRGMv2_0744_5_183
Type: CAZyme
Location: 191803 - 193461 (+)
Type: CAZyme
Location: 191803 - 193461 (+)
Gene ID: HRGMv2_0744_5_184
Type: CAZyme
Location: 193500 - 195644 (+)
Type: CAZyme
Location: 193500 - 195644 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma sp900555925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0744_5_179 | vegan > omnivore | 1.35764 | 0.03539 |
| HRGMv2_0744_5_179 | vegetarian > omnivore | 1.37004 | 0.02100 |
| HRGMv2_0744_5_180 | vegan > omnivore | 1.16927 | 0.03539 |
| HRGMv2_0744_5_180 | vegetarian > omnivore | 1.27494 | 0.02100 |
| HRGMv2_0744_5_181 | vegetarian > omnivore | 1.63408 | 0.02100 |
| HRGMv2_0744_5_182 | vegan > omnivore | 1.75543 | 0.03539 |
| HRGMv2_0744_5_182 | vegetarian > omnivore | 1.53519 | 0.02100 |
| HRGMv2_0744_5_183 | vegetarian > omnivore | 1.49193 | 0.01451 |
| HRGMv2_0744_5_183 | vegetarian > vegan | 1.04859 | 0.00894 |
| HRGMv2_0744_5_184 | vegan > omnivore | 1.07524 | 0.03539 |
| HRGMv2_0744_5_184 | vegetarian > omnivore | 1.01677 | 0.02100 |