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Cluster: HRGMv2_0744_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0744_5 HRGMv2_0744_5_67 65881 66609 + 9.B.18.1.2
CAZyme HRGMv2_0744_5 HRGMv2_0744_5_68 66712 67815 + GT4
pfam HRGMv2_0744_5 HRGMv2_0744_5_69 67832 68797 + CDP-OH_P_transf
CAZyme HRGMv2_0744_5 HRGMv2_0744_5_70 68794 69921 + GT4
pfam HRGMv2_0744_5 HRGMv2_0744_5_71 69905 71377 + O-ag_pol_Wzy
CAZyme HRGMv2_0744_5 HRGMv2_0744_5_72 71524 72579 + GT2
pfam HRGMv2_0744_5 HRGMv2_0744_5_73 72572 73996 + Polysacc_synt | Polysacc_synt_3
pfam HRGMv2_0744_5 HRGMv2_0744_5_74 74095 74517 + CTP_transf_like
CAZyme HRGMv2_0744_5 HRGMv2_0744_5_75 74635 76854 + GH78
Gene ID: HRGMv2_0744_5_67
Type: TC
Location: 65881 - 66609 (+)
Gene ID: HRGMv2_0744_5_68
Type: CAZyme
Location: 66712 - 67815 (+)
Gene ID: HRGMv2_0744_5_69
Type: pfam
Location: 67832 - 68797 (+)
Gene ID: HRGMv2_0744_5_70
Type: CAZyme
Location: 68794 - 69921 (+)
Gene ID: HRGMv2_0744_5_71
Type: pfam
Location: 69905 - 71377 (+)
Gene ID: HRGMv2_0744_5_72
Type: CAZyme
Location: 71524 - 72579 (+)
Gene ID: HRGMv2_0744_5_73
Type: pfam
Location: 72572 - 73996 (+)
Gene ID: HRGMv2_0744_5_74
Type: pfam
Location: 74095 - 74517 (+)
Gene ID: HRGMv2_0744_5_75
Type: CAZyme
Location: 74635 - 76854 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0744_5_74 vegetarian > vegan 1.90518 0.00894

🧭 Explore Read Mapping of CGC

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