dbCAN HGM

Cluster: HRGMv2_0744_CGC14

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_0744_4	HRGMv2_0744_4_22	21449	24085	+	GH43_32
pfam	HRGMv2_0744_4	HRGMv2_0744_4_23	24157	25692	+	SBP_bac_1
TC	HRGMv2_0744_4	HRGMv2_0744_4_24	25777	26742	+	3.A.1.1.3
TC	HRGMv2_0744_4	HRGMv2_0744_4_25	26756	27637	+	3.A.1.1.36
CAZyme	HRGMv2_0744_4	HRGMv2_0744_4_26	27717	29501	+	GH2
CAZyme	HRGMv2_0744_4	HRGMv2_0744_4_27	29498	30691	+	CE2
CAZyme	HRGMv2_0744_4	HRGMv2_0744_4_28	30864	31976	+	GH5_13
CAZyme	HRGMv2_0744_4	HRGMv2_0744_4_29	31973	33163	+	CE2

Gene ID: HRGMv2_0744_4_22
Type: CAZyme
Location: 21449 - 24085 (+)

Gene ID: HRGMv2_0744_4_23
Type: pfam
Location: 24157 - 25692 (+)

Gene ID: HRGMv2_0744_4_24
Type: TC
Location: 25777 - 26742 (+)

Gene ID: HRGMv2_0744_4_25
Type: TC
Location: 26756 - 27637 (+)

Gene ID: HRGMv2_0744_4_26
Type: CAZyme
Location: 27717 - 29501 (+)

Gene ID: HRGMv2_0744_4_27
Type: CAZyme
Location: 29498 - 30691 (+)

Gene ID: HRGMv2_0744_4_28
Type: CAZyme
Location: 30864 - 31976 (+)

Gene ID: HRGMv2_0744_4_29
Type: CAZyme
Location: 31973 - 33163 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_0744_4_24	vegan > omnivore	1.11135	0.03539
HRGMv2_0744_4_28	vegetarian > omnivore	2.24837	0.02100
HRGMv2_0744_4_28	vegetarian > vegan	1.84218	0.00894
HRGMv2_0744_4_29	vegan > omnivore	1.04302	0.03539