Cluster: HRGMv2_0744_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0744
- CGC Family ID: CGCFAM_00339
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0744_3 | HRGMv2_0744_3_69 | 84780 | 86069 | + | 3.A.1.1.2 |
| TC | HRGMv2_0744_3 | HRGMv2_0744_3_70 | 86082 | 86981 | + | 3.A.1.1.18 |
| TC | HRGMv2_0744_3 | HRGMv2_0744_3_71 | 86983 | 87876 | + | 3.A.1.1.36 |
| CAZyme | HRGMv2_0744_3 | HRGMv2_0744_3_72 | 87881 | 89581 | + | GH2 |
| CAZyme | HRGMv2_0744_3 | HRGMv2_0744_3_73 | 89600 | 91537 | + | GH51_1 |
Gene ID: HRGMv2_0744_3_69
Type: TC
Location: 84780 - 86069 (+)
Type: TC
Location: 84780 - 86069 (+)
Gene ID: HRGMv2_0744_3_70
Type: TC
Location: 86082 - 86981 (+)
Type: TC
Location: 86082 - 86981 (+)
Gene ID: HRGMv2_0744_3_71
Type: TC
Location: 86983 - 87876 (+)
Type: TC
Location: 86983 - 87876 (+)
Gene ID: HRGMv2_0744_3_72
Type: CAZyme
Location: 87881 - 89581 (+)
Type: CAZyme
Location: 87881 - 89581 (+)
Gene ID: HRGMv2_0744_3_73
Type: CAZyme
Location: 89600 - 91537 (+)
Type: CAZyme
Location: 89600 - 91537 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma sp900555925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0744_3_69 | vegan > omnivore | 1.74942 | 0.03539 |
| HRGMv2_0744_3_69 | vegetarian > omnivore | 2.24175 | 0.02100 |
| HRGMv2_0744_3_71 | vegan > omnivore | 2.75922 | 0.03539 |
| HRGMv2_0744_3_71 | vegetarian > omnivore | 2.02034 | 0.02100 |
| HRGMv2_0744_3_72 | vegan > omnivore | 1.39204 | 0.03539 |