Cluster: HRGMv2_0735_CGC55
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0735
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0735_212 | HRGMv2_0735_212_3 | 1766 | 2395 | + | 9.B.18.1.2 |
| pfam | HRGMv2_0735_212 | HRGMv2_0735_212_4 | 2431 | 3078 | + | PglD_N |
| CAZyme | HRGMv2_0735_212 | HRGMv2_0735_212_5 | 3075 | 4160 | + | GT4 |
Gene ID: HRGMv2_0735_212_3
Type: TC
Location: 1766 - 2395 (+)
Type: TC
Location: 1766 - 2395 (+)
Gene ID: HRGMv2_0735_212_4
Type: pfam
Location: 2431 - 3078 (+)
Type: pfam
Location: 2431 - 3078 (+)
Gene ID: HRGMv2_0735_212_5
Type: CAZyme
Location: 3075 - 4160 (+)
Type: CAZyme
Location: 3075 - 4160 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp900548145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0735_212_3 | vegetarian > vegan | 2.21374 | 0.00608 |
| HRGMv2_0735_212_5 | vegetarian > vegan | 2.51805 | 0.00457 |