Cluster: HRGMv2_0735_CGC54
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0735
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0735_204 | HRGMv2_0735_204_2 | 714 | 2309 | + | GH110 |
| NULL(UNKNOWN) | HRGMv2_0735_204 | HRGMv2_0735_204_3 | 2418 | 2585 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_0735_204 | HRGMv2_0735_204_4 | 2675 | 2770 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0735_204 | HRGMv2_0735_204_5 | 3081 | 3911 | + | 3.A.1.1.39 |
Gene ID: HRGMv2_0735_204_2
Type: CAZyme
Location: 714 - 2309 (+)
Type: CAZyme
Location: 714 - 2309 (+)
Gene ID: HRGMv2_0735_204_3
Type:
Location: 2418 - 2585 (+)
Type:
Location: 2418 - 2585 (+)
Gene ID: HRGMv2_0735_204_4
Type:
Location: 2675 - 2770 (-)
Type:
Location: 2675 - 2770 (-)
Gene ID: HRGMv2_0735_204_5
Type: TC
Location: 3081 - 3911 (+)
Type: TC
Location: 3081 - 3911 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp900548145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.