Cluster: HRGMv2_0735_CGC36
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0735
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0735_53 | HRGMv2_0735_53_1 | 326 | 2005 | + | GH163 |
| peptidase | HRGMv2_0735_53 | HRGMv2_0735_53_2 | 2105 | 3895 | + | M03.UPB |
| TC | HRGMv2_0735_53 | HRGMv2_0735_53_3 | 4647 | 5726 | - | 3.A.1.1.16 |
| TC | HRGMv2_0735_53 | HRGMv2_0735_53_4 | 5850 | 8351 | - | 3.A.1.20.4 |
Gene ID: HRGMv2_0735_53_1
Type: CAZyme
Location: 326 - 2005 (+)
Type: CAZyme
Location: 326 - 2005 (+)
Gene ID: HRGMv2_0735_53_2
Type: peptidase
Location: 2105 - 3895 (+)
Type: peptidase
Location: 2105 - 3895 (+)
Gene ID: HRGMv2_0735_53_3
Type: TC
Location: 4647 - 5726 (-)
Type: TC
Location: 4647 - 5726 (-)
Gene ID: HRGMv2_0735_53_4
Type: TC
Location: 5850 - 8351 (-)
Type: TC
Location: 5850 - 8351 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp900548145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0735_53_1 | vegetarian > omnivore | 1.98123 | 0.00143 |
| HRGMv2_0735_53_4 | vegetarian > vegan | 1.50882 | 0.00608 |