dbCAN HGM

Cluster: HRGMv2_0735_CGC15

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_0735_10	HRGMv2_0735_10_4	3764	4450	+	3.A.1.3.14
TC	HRGMv2_0735_10	HRGMv2_0735_10_5	4419	5207	+	3.A.1.3.13
TC	HRGMv2_0735_10	HRGMv2_0735_10_6	5247	6047	+	3.A.1.3.14
CAZyme	HRGMv2_0735_10	HRGMv2_0735_10_7	6179	7510	-	GH4
TC	HRGMv2_0735_10	HRGMv2_0735_10_8	7839	8774	+	3.A.1.1.10
TC	HRGMv2_0735_10	HRGMv2_0735_10_9	8792	9736	+	3.A.1.1.10
TC	HRGMv2_0735_10	HRGMv2_0735_10_10	9779	11413	+	3.A.1.1.10

Gene ID: HRGMv2_0735_10_4
Type: TC
Location: 3764 - 4450 (+)

Gene ID: HRGMv2_0735_10_5
Type: TC
Location: 4419 - 5207 (+)

Gene ID: HRGMv2_0735_10_6
Type: TC
Location: 5247 - 6047 (+)

Gene ID: HRGMv2_0735_10_7
Type: CAZyme
Location: 6179 - 7510 (-)

Gene ID: HRGMv2_0735_10_8
Type: TC
Location: 7839 - 8774 (+)

Gene ID: HRGMv2_0735_10_9
Type: TC
Location: 8792 - 9736 (+)

Gene ID: HRGMv2_0735_10_10
Type: TC
Location: 9779 - 11413 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_0735_10_6	vegetarian > omnivore	1.31690	0.00143
HRGMv2_0735_10_7	vegetarian > omnivore	2.64342	0.00143
HRGMv2_0735_10_8	vegetarian > omnivore	1.59320	0.00143
HRGMv2_0735_10_9	vegetarian > omnivore	1.94744	0.00143
HRGMv2_0735_10_10	vegetarian > omnivore	1.85132	0.00143

Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_0735_10_6	vegan > omnivore	1.11333	0.01332