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Cluster: HRGMv2_0735_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0735_9 HRGMv2_0735_9_31 28589 29935 + GH1
TF HRGMv2_0735_9 HRGMv2_0735_9_32 30060 30920 - HTH_AraC | HTH_AraC
STP HRGMv2_0735_9 HRGMv2_0735_9_33 31074 32360 + SBP_bac_1
TC HRGMv2_0735_9 HRGMv2_0735_9_34 32510 33403 + 3.A.1.1.34
TC HRGMv2_0735_9 HRGMv2_0735_9_35 33407 34237 + 3.A.1.1.20
CAZyme HRGMv2_0735_9 HRGMv2_0735_9_36 34287 35204 + GH137
CAZyme HRGMv2_0735_9 HRGMv2_0735_9_37 35236 36717 + GH142
Gene ID: HRGMv2_0735_9_31
Type: CAZyme
Location: 28589 - 29935 (+)
Gene ID: HRGMv2_0735_9_32
Type: TF
Location: 30060 - 30920 (-)
Gene ID: HRGMv2_0735_9_33
Type: STP
Location: 31074 - 32360 (+)
Gene ID: HRGMv2_0735_9_34
Type: TC
Location: 32510 - 33403 (+)
Gene ID: HRGMv2_0735_9_35
Type: TC
Location: 33407 - 34237 (+)
Gene ID: HRGMv2_0735_9_36
Type: CAZyme
Location: 34287 - 35204 (+)
Gene ID: HRGMv2_0735_9_37
Type: CAZyme
Location: 35236 - 36717 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0735_9_37 vegetarian > omnivore 5.50148 0.00143
HRGMv2_0735_9_37 vegetarian > vegan 3.76174 0.00608

🧭 Explore Read Mapping of CGC

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