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Cluster: HRGMv2_0733_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0733_2 HRGMv2_0733_2_92 149733 151358 + 3.A.1.1.38
TF HRGMv2_0733_2 HRGMv2_0733_2_93 151428 152633 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_0733_2 HRGMv2_0733_2_94 152747 155200 + GH3
TC HRGMv2_0733_2 HRGMv2_0733_2_95 155197 157062 + 2.A.2.3.2
pfam HRGMv2_0733_2 HRGMv2_0733_2_96 157080 157880 + Lipase_GDSL | Lipase_GDSL_2
CAZyme HRGMv2_0733_2 HRGMv2_0733_2_97 157932 160490 + CBM67 | GH78
CAZyme HRGMv2_0733_2 HRGMv2_0733_2_98 160917 163097 + GH36
NULL(UNKNOWN) HRGMv2_0733_2 HRGMv2_0733_2_99 163102 164379 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_0733_2 HRGMv2_0733_2_100 164564 165394 - 0035607
CAZyme HRGMv2_0733_2 HRGMv2_0733_2_101 165728 168646 + GH43
Gene ID: HRGMv2_0733_2_92
Type: TC
Location: 149733 - 151358 (+)
Gene ID: HRGMv2_0733_2_93
Type: TF
Location: 151428 - 152633 (-)
Gene ID: HRGMv2_0733_2_94
Type: CAZyme
Location: 152747 - 155200 (+)
Gene ID: HRGMv2_0733_2_95
Type: TC
Location: 155197 - 157062 (+)
Gene ID: HRGMv2_0733_2_96
Type: pfam
Location: 157080 - 157880 (+)
Gene ID: HRGMv2_0733_2_97
Type: CAZyme
Location: 157932 - 160490 (+)
Gene ID: HRGMv2_0733_2_98
Type: CAZyme
Location: 160917 - 163097 (+)
Gene ID: HRGMv2_0733_2_99
Type:
Location: 163102 - 164379 (+)
Gene ID: HRGMv2_0733_2_100
Type: TF
Location: 164564 - 165394 (-)
Gene ID: HRGMv2_0733_2_101
Type: CAZyme
Location: 165728 - 168646 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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