Cluster: HRGMv2_0733_CGC23
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0733
- CGC Family ID: CGCFAM_01340
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0733_19 | HRGMv2_0733_19_8 | 11039 | 13237 | - | GH78 |
| pfam | HRGMv2_0733_19 | HRGMv2_0733_19_9 | 13308 | 14468 | - | FAD_binding_2 | GIDA | DAO | FAD_oxidored | FAD_oxidored | NAD_binding_8 |
| pfam | HRGMv2_0733_19 | HRGMv2_0733_19_10 | 14582 | 17593 | - | Big_2 |
| CAZyme | HRGMv2_0733_19 | HRGMv2_0733_19_11 | 17590 | 19575 | - | GH163 |
| NULL(UNKNOWN) | HRGMv2_0733_19 | HRGMv2_0733_19_12 | 19579 | 22704 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0733_19 | HRGMv2_0733_19_13 | 22795 | 23673 | - | 3.A.1.1.25 |
| pfam | HRGMv2_0733_19 | HRGMv2_0733_19_14 | 23676 | 24602 | - | BPD_transp_1 |
| NULL(UNKNOWN) | HRGMv2_0733_19 | HRGMv2_0733_19_15 | 24630 | 26309 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0733_19 | HRGMv2_0733_19_16 | 26315 | 28633 | - | GH78 |
| TF | HRGMv2_0733_19 | HRGMv2_0733_19_17 | 28849 | 29679 | + | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | HRGMv2_0733_19 | HRGMv2_0733_19_18 | 29844 | 30116 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0733_19 | HRGMv2_0733_19_19 | 30608 | 32518 | - | CBM67 | GH78 |
Gene ID: HRGMv2_0733_19_8
Type: CAZyme
Location: 11039 - 13237 (-)
Type: CAZyme
Location: 11039 - 13237 (-)
Gene ID: HRGMv2_0733_19_9
Type: pfam
Location: 13308 - 14468 (-)
Type: pfam
Location: 13308 - 14468 (-)
Gene ID: HRGMv2_0733_19_10
Type: pfam
Location: 14582 - 17593 (-)
Type: pfam
Location: 14582 - 17593 (-)
Gene ID: HRGMv2_0733_19_11
Type: CAZyme
Location: 17590 - 19575 (-)
Type: CAZyme
Location: 17590 - 19575 (-)
Gene ID: HRGMv2_0733_19_12
Type:
Location: 19579 - 22704 (-)
Type:
Location: 19579 - 22704 (-)
Gene ID: HRGMv2_0733_19_13
Type: TC
Location: 22795 - 23673 (-)
Type: TC
Location: 22795 - 23673 (-)
Gene ID: HRGMv2_0733_19_14
Type: pfam
Location: 23676 - 24602 (-)
Type: pfam
Location: 23676 - 24602 (-)
Gene ID: HRGMv2_0733_19_15
Type:
Location: 24630 - 26309 (-)
Type:
Location: 24630 - 26309 (-)
Gene ID: HRGMv2_0733_19_16
Type: CAZyme
Location: 26315 - 28633 (-)
Type: CAZyme
Location: 26315 - 28633 (-)
Gene ID: HRGMv2_0733_19_17
Type: TF
Location: 28849 - 29679 (+)
Type: TF
Location: 28849 - 29679 (+)
Gene ID: HRGMv2_0733_19_18
Type:
Location: 29844 - 30116 (-)
Type:
Location: 29844 - 30116 (-)
Gene ID: HRGMv2_0733_19_19
Type: CAZyme
Location: 30608 - 32518 (-)
Type: CAZyme
Location: 30608 - 32518 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-314
Genus
Fimimonas
Species
Fimimonas sp003537755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0733_19_17 | vegetarian > vegan | 1.46165 | 0.04672 |