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Cluster: HRGMv2_0733_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0733_17 HRGMv2_0733_17_15 19596 21170 - GH20
STP HRGMv2_0733_17 HRGMv2_0733_17_16 21357 23039 - SBP_bac_1
TC HRGMv2_0733_17 HRGMv2_0733_17_17 23036 23845 - 3.A.1.11.8
TC HRGMv2_0733_17 HRGMv2_0733_17_18 23842 24636 - 3.A.1.11.8
TC HRGMv2_0733_17 HRGMv2_0733_17_19 24626 26089 - 3.A.1.11.8
Gene ID: HRGMv2_0733_17_15
Type: CAZyme
Location: 19596 - 21170 (-)
Gene ID: HRGMv2_0733_17_16
Type: STP
Location: 21357 - 23039 (-)
Gene ID: HRGMv2_0733_17_17
Type: TC
Location: 23036 - 23845 (-)
Gene ID: HRGMv2_0733_17_18
Type: TC
Location: 23842 - 24636 (-)
Gene ID: HRGMv2_0733_17_19
Type: TC
Location: 24626 - 26089 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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