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Cluster: HRGMv2_0733_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0733_14 HRGMv2_0733_14_5 4114 6402 + CBM67 | GH78
NULL(UNKNOWN) HRGMv2_0733_14 HRGMv2_0733_14_6 6409 8082 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0733_14 HRGMv2_0733_14_7 8110 9036 + BPD_transp_1
TC HRGMv2_0733_14 HRGMv2_0733_14_8 9039 9917 + 3.A.1.1.6
NULL(UNKNOWN) HRGMv2_0733_14 HRGMv2_0733_14_9 10011 13136 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0733_14 HRGMv2_0733_14_10 13358 15124 + GH163
pfam HRGMv2_0733_14 HRGMv2_0733_14_11 15121 18135 + Big_2
pfam HRGMv2_0733_14 HRGMv2_0733_14_12 18256 19416 + FAD_binding_2 | GIDA | DAO | FAD_oxidored | FAD_oxidored | NAD_binding_8
CAZyme HRGMv2_0733_14 HRGMv2_0733_14_13 19485 21665 + GH78
Gene ID: HRGMv2_0733_14_5
Type: CAZyme
Location: 4114 - 6402 (+)
Gene ID: HRGMv2_0733_14_6
Type:
Location: 6409 - 8082 (+)
Gene ID: HRGMv2_0733_14_7
Type: pfam
Location: 8110 - 9036 (+)
Gene ID: HRGMv2_0733_14_8
Type: TC
Location: 9039 - 9917 (+)
Gene ID: HRGMv2_0733_14_9
Type:
Location: 10011 - 13136 (+)
Gene ID: HRGMv2_0733_14_10
Type: CAZyme
Location: 13358 - 15124 (+)
Gene ID: HRGMv2_0733_14_11
Type: pfam
Location: 15121 - 18135 (+)
Gene ID: HRGMv2_0733_14_12
Type: pfam
Location: 18256 - 19416 (+)
Gene ID: HRGMv2_0733_14_13
Type: CAZyme
Location: 19485 - 21665 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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