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Cluster: HRGMv2_0733_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0733_2 HRGMv2_0733_2_66 107855 109873 + GH97
STP HRGMv2_0733_2 HRGMv2_0733_2_67 109890 111359 + SBP_bac_1
pfam HRGMv2_0733_2 HRGMv2_0733_2_68 111371 112354 + BPD_transp_1
TC HRGMv2_0733_2 HRGMv2_0733_2_69 112314 113240 + 3.A.1.1.28
TC HRGMv2_0733_2 HRGMv2_0733_2_70 113251 114960 + 3.A.1.1.27
NULL(UNKNOWN) HRGMv2_0733_2 HRGMv2_0733_2_71 114974 116713 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0733_2 HRGMv2_0733_2_72 116792 119326 + GH31 | GH31_20
Gene ID: HRGMv2_0733_2_66
Type: CAZyme
Location: 107855 - 109873 (+)
Gene ID: HRGMv2_0733_2_67
Type: STP
Location: 109890 - 111359 (+)
Gene ID: HRGMv2_0733_2_68
Type: pfam
Location: 111371 - 112354 (+)
Gene ID: HRGMv2_0733_2_69
Type: TC
Location: 112314 - 113240 (+)
Gene ID: HRGMv2_0733_2_70
Type: TC
Location: 113251 - 114960 (+)
Gene ID: HRGMv2_0733_2_71
Type:
Location: 114974 - 116713 (+)
Gene ID: HRGMv2_0733_2_72
Type: CAZyme
Location: 116792 - 119326 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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