Cluster: HRGMv2_0732_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0732
- CGC Family ID: CGCFAM_02105
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0732_34 | HRGMv2_0732_34_5 | 5791 | 7992 | - | 9.B.74.1.3 |
| STP | HRGMv2_0732_34 | HRGMv2_0732_34_6 | 8241 | 8861 | + | TetR_N |
| CAZyme | HRGMv2_0732_34 | HRGMv2_0732_34_7 | 9114 | 10247 | - | GT28 |
| TF | HRGMv2_0732_34 | HRGMv2_0732_34_8 | 10424 | 10873 | + | MarR |
| pfam | HRGMv2_0732_34 | HRGMv2_0732_34_9 | 11024 | 12184 | + | MFS_1 |
| CAZyme | HRGMv2_0732_34 | HRGMv2_0732_34_10 | 12267 | 13358 | + | GT28 |
Gene ID: HRGMv2_0732_34_5
Type: TC
Location: 5791 - 7992 (-)
Type: TC
Location: 5791 - 7992 (-)
Gene ID: HRGMv2_0732_34_6
Type: STP
Location: 8241 - 8861 (+)
Type: STP
Location: 8241 - 8861 (+)
Gene ID: HRGMv2_0732_34_7
Type: CAZyme
Location: 9114 - 10247 (-)
Type: CAZyme
Location: 9114 - 10247 (-)
Gene ID: HRGMv2_0732_34_8
Type: TF
Location: 10424 - 10873 (+)
Type: TF
Location: 10424 - 10873 (+)
Gene ID: HRGMv2_0732_34_9
Type: pfam
Location: 11024 - 12184 (+)
Type: pfam
Location: 11024 - 12184 (+)
Gene ID: HRGMv2_0732_34_10
Type: CAZyme
Location: 12267 - 13358 (+)
Type: CAZyme
Location: 12267 - 13358 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Christensenellaceae
Genus
Scybalosoma
Species
Scybalosoma faecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.