Cluster: HRGMv2_0732_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0732
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0732_2 | HRGMv2_0732_2_42 | 41291 | 42532 | + | GT76 |
| pfam | HRGMv2_0732_2 | HRGMv2_0732_2_43 | 42580 | 43707 | + | DUF34_NIF3 |
| pfam | HRGMv2_0732_2 | HRGMv2_0732_2_44 | 43758 | 44585 | + | Zn_ribbon_9 |
| TC | HRGMv2_0732_2 | HRGMv2_0732_2_45 | 45178 | 46533 | + | 2.A.38.1.1 |
| TC | HRGMv2_0732_2 | HRGMv2_0732_2_46 | 46537 | 48015 | + | 2.A.38.1.1 |
Gene ID: HRGMv2_0732_2_42
Type: CAZyme
Location: 41291 - 42532 (+)
Type: CAZyme
Location: 41291 - 42532 (+)
Gene ID: HRGMv2_0732_2_43
Type: pfam
Location: 42580 - 43707 (+)
Type: pfam
Location: 42580 - 43707 (+)
Gene ID: HRGMv2_0732_2_44
Type: pfam
Location: 43758 - 44585 (+)
Type: pfam
Location: 43758 - 44585 (+)
Gene ID: HRGMv2_0732_2_45
Type: TC
Location: 45178 - 46533 (+)
Type: TC
Location: 45178 - 46533 (+)
Gene ID: HRGMv2_0732_2_46
Type: TC
Location: 46537 - 48015 (+)
Type: TC
Location: 46537 - 48015 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Christensenellaceae
Genus
Scybalosoma
Species
Scybalosoma faecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.