Cluster: HRGMv2_0729_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0729
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0729_16 | HRGMv2_0729_16_5 | 5595 | 6173 | - | 4.F.1.1.8 |
| pfam | HRGMv2_0729_16 | HRGMv2_0729_16_6 | 6157 | 7452 | - | UPF0004 | Radical_SAM | TRAM_2 |
| TC | HRGMv2_0729_16 | HRGMv2_0729_16_7 | 7445 | 10843 | - | 3.A.12.1.1 |
| pfam | HRGMv2_0729_16 | HRGMv2_0729_16_8 | 10990 | 11355 | - | dUTPase_2 |
| peptidase | HRGMv2_0729_16 | HRGMv2_0729_16_9 | 11382 | 12641 | - | M16.UPB |
| CAZyme | HRGMv2_0729_16 | HRGMv2_0729_16_10 | 12702 | 13409 | - | CE4 |
Gene ID: HRGMv2_0729_16_5
Type: TC
Location: 5595 - 6173 (-)
Type: TC
Location: 5595 - 6173 (-)
Gene ID: HRGMv2_0729_16_6
Type: pfam
Location: 6157 - 7452 (-)
Type: pfam
Location: 6157 - 7452 (-)
Gene ID: HRGMv2_0729_16_7
Type: TC
Location: 7445 - 10843 (-)
Type: TC
Location: 7445 - 10843 (-)
Gene ID: HRGMv2_0729_16_8
Type: pfam
Location: 10990 - 11355 (-)
Type: pfam
Location: 10990 - 11355 (-)
Gene ID: HRGMv2_0729_16_9
Type: peptidase
Location: 11382 - 12641 (-)
Type: peptidase
Location: 11382 - 12641 (-)
Gene ID: HRGMv2_0729_16_10
Type: CAZyme
Location: 12702 - 13409 (-)
Type: CAZyme
Location: 12702 - 13409 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
UBA10677
Species
UBA10677 sp900553005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.