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Cluster: HRGMv2_0729_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0729_15 HRGMv2_0729_15_15 11933 13411 + 3.A.1.11.8
TC HRGMv2_0729_15 HRGMv2_0729_15_16 13398 14210 + 3.A.1.11.2
TC HRGMv2_0729_15 HRGMv2_0729_15_17 14207 15031 + 3.A.1.11.2
TC HRGMv2_0729_15 HRGMv2_0729_15_18 15071 16294 + 3.A.1.11.7
STP HRGMv2_0729_15 HRGMv2_0729_15_19 16312 18165 + Pyr_redox_2
pfam HRGMv2_0729_15 HRGMv2_0729_15_20 18533 18814 + SpoVG
TC HRGMv2_0729_15 HRGMv2_0729_15_21 19169 20581 + 2.A.66.1.33
pfam HRGMv2_0729_15 HRGMv2_0729_15_22 20739 21428 + Aldolase_II
pfam HRGMv2_0729_15 HRGMv2_0729_15_23 21482 21730 - SpoIIID
CAZyme HRGMv2_0729_15 HRGMv2_0729_15_24 22284 23207 + GH43_32
Gene ID: HRGMv2_0729_15_15
Type: TC
Location: 11933 - 13411 (+)
Gene ID: HRGMv2_0729_15_16
Type: TC
Location: 13398 - 14210 (+)
Gene ID: HRGMv2_0729_15_17
Type: TC
Location: 14207 - 15031 (+)
Gene ID: HRGMv2_0729_15_18
Type: TC
Location: 15071 - 16294 (+)
Gene ID: HRGMv2_0729_15_19
Type: STP
Location: 16312 - 18165 (+)
Gene ID: HRGMv2_0729_15_20
Type: pfam
Location: 18533 - 18814 (+)
Gene ID: HRGMv2_0729_15_21
Type: TC
Location: 19169 - 20581 (+)
Gene ID: HRGMv2_0729_15_22
Type: pfam
Location: 20739 - 21428 (+)
Gene ID: HRGMv2_0729_15_23
Type: pfam
Location: 21482 - 21730 (-)
Gene ID: HRGMv2_0729_15_24
Type: CAZyme
Location: 22284 - 23207 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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