Cluster: HRGMv2_0729_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0729
- CGC Family ID: CGCFAM_03513
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0729_11 | HRGMv2_0729_11_27 | 29846 | 31138 | + | GH4 |
| pfam | HRGMv2_0729_11 | HRGMv2_0729_11_28 | 31261 | 31836 | - | OmdA |
| TC | HRGMv2_0729_11 | HRGMv2_0729_11_29 | 32278 | 34173 | - | 3.A.3.6.10 |
Gene ID: HRGMv2_0729_11_27
Type: CAZyme
Location: 29846 - 31138 (+)
Type: CAZyme
Location: 29846 - 31138 (+)
Gene ID: HRGMv2_0729_11_28
Type: pfam
Location: 31261 - 31836 (-)
Type: pfam
Location: 31261 - 31836 (-)
Gene ID: HRGMv2_0729_11_29
Type: TC
Location: 32278 - 34173 (-)
Type: TC
Location: 32278 - 34173 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
UBA10677
Species
UBA10677 sp900553005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.