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Cluster: HRGMv2_0729_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0729_41 HRGMv2_0729_41_6 3646 4983 - 2.A.37.2.2
CAZyme HRGMv2_0729_41 HRGMv2_0729_41_7 5160 6938 - GH13_39
pfam HRGMv2_0729_41 HRGMv2_0729_41_8 6946 7530 - Phosphorylase
CAZyme HRGMv2_0729_41 HRGMv2_0729_41_9 7582 9369 - GT35
CAZyme HRGMv2_0729_41 HRGMv2_0729_41_10 9411 11183 - GT5
pfam HRGMv2_0729_41 HRGMv2_0729_41_11 11269 12381 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_0729_41 HRGMv2_0729_41_12 12400 13581 - NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_0729_41 HRGMv2_0729_41_13 13578 15425 - GH13_9
Gene ID: HRGMv2_0729_41_6
Type: TC
Location: 3646 - 4983 (-)
Gene ID: HRGMv2_0729_41_7
Type: CAZyme
Location: 5160 - 6938 (-)
Gene ID: HRGMv2_0729_41_8
Type: pfam
Location: 6946 - 7530 (-)
Gene ID: HRGMv2_0729_41_9
Type: CAZyme
Location: 7582 - 9369 (-)
Gene ID: HRGMv2_0729_41_10
Type: CAZyme
Location: 9411 - 11183 (-)
Gene ID: HRGMv2_0729_41_11
Type: pfam
Location: 11269 - 12381 (-)
Gene ID: HRGMv2_0729_41_12
Type: pfam
Location: 12400 - 13581 (-)
Gene ID: HRGMv2_0729_41_13
Type: CAZyme
Location: 13578 - 15425 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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