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Cluster: HRGMv2_0725_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0725_12 HRGMv2_0725_12_14 14556 15944 + 3.A.1.1.45
TC HRGMv2_0725_12 HRGMv2_0725_12_15 16116 17027 + 3.A.1.1.45
TC HRGMv2_0725_12 HRGMv2_0725_12_16 17027 17872 + 3.A.1.1.45
CAZyme HRGMv2_0725_12 HRGMv2_0725_12_17 17960 19450 + GH77
pfam HRGMv2_0725_12 HRGMv2_0725_12_18 20356 20754 - SdpI
TC HRGMv2_0725_12 HRGMv2_0725_12_19 20901 21485 + 2.A.51.1.6
TC HRGMv2_0725_12 HRGMv2_0725_12_20 21482 22045 + 2.A.51.1.6
Gene ID: HRGMv2_0725_12_14
Type: TC
Location: 14556 - 15944 (+)
Gene ID: HRGMv2_0725_12_15
Type: TC
Location: 16116 - 17027 (+)
Gene ID: HRGMv2_0725_12_16
Type: TC
Location: 17027 - 17872 (+)
Gene ID: HRGMv2_0725_12_17
Type: CAZyme
Location: 17960 - 19450 (+)
Gene ID: HRGMv2_0725_12_18
Type: pfam
Location: 20356 - 20754 (-)
Gene ID: HRGMv2_0725_12_19
Type: TC
Location: 20901 - 21485 (+)
Gene ID: HRGMv2_0725_12_20
Type: TC
Location: 21482 - 22045 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Christensenellales
→
Family
CAG-138
→
Genus
UBA1685
→
Species
UBA1685 sp944366945

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0725_12_15 vegan > omnivore 1.78804 0.00362
HRGMv2_0725_12_15 vegetarian > omnivore 1.26640 0.01276

🧭 Explore Read Mapping of CGC

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