Cluster: HRGMv2_0724_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0724
- CGC Family ID: CGCFAM_01625
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0724_16 | HRGMv2_0724_16_18 | 18398 | 19630 | - | 3.A.1.115.1 |
| TC | HRGMv2_0724_16 | HRGMv2_0724_16_19 | 19627 | 20406 | - | 3.A.1.115.1 |
| pfam | HRGMv2_0724_16 | HRGMv2_0724_16_20 | 20785 | 21288 | - | LigT_PEase | LigT_PEase | 2_5_RNA_ligase2 |
| NULL(UNKNOWN) | HRGMv2_0724_16 | HRGMv2_0724_16_21 | 21974 | 25435 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0724_16 | HRGMv2_0724_16_22 | 26500 | 27108 | + | 9.B.31.1.1 |
| CAZyme | HRGMv2_0724_16 | HRGMv2_0724_16_23 | 27096 | 28220 | + | GT28 |
Gene ID: HRGMv2_0724_16_18
Type: TC
Location: 18398 - 19630 (-)
Type: TC
Location: 18398 - 19630 (-)
Gene ID: HRGMv2_0724_16_19
Type: TC
Location: 19627 - 20406 (-)
Type: TC
Location: 19627 - 20406 (-)
Gene ID: HRGMv2_0724_16_20
Type: pfam
Location: 20785 - 21288 (-)
Type: pfam
Location: 20785 - 21288 (-)
Gene ID: HRGMv2_0724_16_21
Type:
Location: 21974 - 25435 (-)
Type:
Location: 21974 - 25435 (-)
Gene ID: HRGMv2_0724_16_22
Type: TC
Location: 26500 - 27108 (+)
Type: TC
Location: 26500 - 27108 (+)
Gene ID: HRGMv2_0724_16_23
Type: CAZyme
Location: 27096 - 28220 (+)
Type: CAZyme
Location: 27096 - 28220 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
QALW01
Genus
Neochristensenella
Species
Neochristensenella gallicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.