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Cluster: HRGMv2_0724_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0724_1 HRGMv2_0724_1_83 92278 94320 - 9.A.8.1.6
STP HRGMv2_0724_1 HRGMv2_0724_1_84 94313 94546 - FeoA
NULL(UNKNOWN) HRGMv2_0724_1 HRGMv2_0724_1_85 94691 95509 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0724_1 HRGMv2_0724_1_86 95503 96201 - 3.A.1.132.6
pfam HRGMv2_0724_1 HRGMv2_0724_1_87 96634 97821 + S-methyl_trans
pfam HRGMv2_0724_1 HRGMv2_0724_1_88 97760 99613 - Radical_SAM_N | DUF3362
CAZyme HRGMv2_0724_1 HRGMv2_0724_1_89 99714 107921 - GH94 | GT84
TC HRGMv2_0724_1 HRGMv2_0724_1_90 108564 109253 - 1.C.82.1.1
Gene ID: HRGMv2_0724_1_83
Type: TC
Location: 92278 - 94320 (-)
Gene ID: HRGMv2_0724_1_84
Type: STP
Location: 94313 - 94546 (-)
Gene ID: HRGMv2_0724_1_85
Type:
Location: 94691 - 95509 (-)
Gene ID: HRGMv2_0724_1_86
Type: TC
Location: 95503 - 96201 (-)
Gene ID: HRGMv2_0724_1_87
Type: pfam
Location: 96634 - 97821 (+)
Gene ID: HRGMv2_0724_1_88
Type: pfam
Location: 97760 - 99613 (-)
Gene ID: HRGMv2_0724_1_89
Type: CAZyme
Location: 99714 - 107921 (-)
Gene ID: HRGMv2_0724_1_90
Type: TC
Location: 108564 - 109253 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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