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Cluster: HRGMv2_0721_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0721_7 HRGMv2_0721_7_3 1017 1436 - 3.A.7.19.1
pfam HRGMv2_0721_7 HRGMv2_0721_7_4 1450 1731 - Ribosomal_S6
pfam HRGMv2_0721_7 HRGMv2_0721_7_5 1917 2939 - ADH_zinc_N | ADH_N
CAZyme HRGMv2_0721_7 HRGMv2_0721_7_6 3134 9199 - GH43_33
pfam HRGMv2_0721_7 HRGMv2_0721_7_7 9428 10282 - Lactamase_B_2
pfam HRGMv2_0721_7 HRGMv2_0721_7_8 10359 11093 - PseudoU_synth_1 | PseudoU_synth_1
TC HRGMv2_0721_7 HRGMv2_0721_7_9 11106 11954 - 3.A.1.25.4
TC HRGMv2_0721_7 HRGMv2_0721_7_10 11951 12811 - 3.A.1.25.6
TC HRGMv2_0721_7 HRGMv2_0721_7_11 12822 13649 - 3.A.1.26.7
Gene ID: HRGMv2_0721_7_3
Type: TC
Location: 1017 - 1436 (-)
Gene ID: HRGMv2_0721_7_4
Type: pfam
Location: 1450 - 1731 (-)
Gene ID: HRGMv2_0721_7_5
Type: pfam
Location: 1917 - 2939 (-)
Gene ID: HRGMv2_0721_7_6
Type: CAZyme
Location: 3134 - 9199 (-)
Gene ID: HRGMv2_0721_7_7
Type: pfam
Location: 9428 - 10282 (-)
Gene ID: HRGMv2_0721_7_8
Type: pfam
Location: 10359 - 11093 (-)
Gene ID: HRGMv2_0721_7_9
Type: TC
Location: 11106 - 11954 (-)
Gene ID: HRGMv2_0721_7_10
Type: TC
Location: 11951 - 12811 (-)
Gene ID: HRGMv2_0721_7_11
Type: TC
Location: 12822 - 13649 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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