Cluster: HRGMv2_0721_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0721
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0721_3 | HRGMv2_0721_3_46 | 59543 | 60505 | + | 3.A.1.1.21 |
| TC | HRGMv2_0721_3 | HRGMv2_0721_3_47 | 60518 | 61411 | + | 3.A.1.1.48 |
| NULL(UNKNOWN) | HRGMv2_0721_3 | HRGMv2_0721_3_48 | 61447 | 64278 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0721_3 | HRGMv2_0721_3_49 | 64290 | 66299 | + | GH163 |
| pfam | HRGMv2_0721_3 | HRGMv2_0721_3_50 | 66317 | 72121 | + | Big_2 | Big_2 | Big_2 | Big-like |
| pfam | HRGMv2_0721_3 | HRGMv2_0721_3_51 | 72138 | 72866 | + | Exo_endo_phos |
| CAZyme | HRGMv2_0721_3 | HRGMv2_0721_3_52 | 72890 | 74794 | + | GH127 |
Gene ID: HRGMv2_0721_3_46
Type: TC
Location: 59543 - 60505 (+)
Type: TC
Location: 59543 - 60505 (+)
Gene ID: HRGMv2_0721_3_47
Type: TC
Location: 60518 - 61411 (+)
Type: TC
Location: 60518 - 61411 (+)
Gene ID: HRGMv2_0721_3_48
Type:
Location: 61447 - 64278 (+)
Type:
Location: 61447 - 64278 (+)
Gene ID: HRGMv2_0721_3_49
Type: CAZyme
Location: 64290 - 66299 (+)
Type: CAZyme
Location: 64290 - 66299 (+)
Gene ID: HRGMv2_0721_3_50
Type: pfam
Location: 66317 - 72121 (+)
Type: pfam
Location: 66317 - 72121 (+)
Gene ID: HRGMv2_0721_3_51
Type: pfam
Location: 72138 - 72866 (+)
Type: pfam
Location: 72138 - 72866 (+)
Gene ID: HRGMv2_0721_3_52
Type: CAZyme
Location: 72890 - 74794 (+)
Type: CAZyme
Location: 72890 - 74794 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
UBA10677
Species
UBA10677 sp900543755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.