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Cluster: HRGMv2_0721_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0721_2 HRGMv2_0721_2_49 53096 54466 - 2.A.37.2.2
CAZyme HRGMv2_0721_2 HRGMv2_0721_2_50 54593 56368 - GH13_39
CAZyme HRGMv2_0721_2 HRGMv2_0721_2_51 56373 58799 - GT35
CAZyme HRGMv2_0721_2 HRGMv2_0721_2_52 58836 60734 - GT5
pfam HRGMv2_0721_2 HRGMv2_0721_2_53 60817 61929 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_0721_2 HRGMv2_0721_2_54 61946 63127 - NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_0721_2 HRGMv2_0721_2_55 63124 64989 - GH13_9
pfam HRGMv2_0721_2 HRGMv2_0721_2_56 65331 67412 + Gln-synt_C | GSIII_N | Gln-synt_C-ter
TC HRGMv2_0721_2 HRGMv2_0721_2_57 67521 69275 + 1.A.11.2.7
Gene ID: HRGMv2_0721_2_49
Type: TC
Location: 53096 - 54466 (-)
Gene ID: HRGMv2_0721_2_50
Type: CAZyme
Location: 54593 - 56368 (-)
Gene ID: HRGMv2_0721_2_51
Type: CAZyme
Location: 56373 - 58799 (-)
Gene ID: HRGMv2_0721_2_52
Type: CAZyme
Location: 58836 - 60734 (-)
Gene ID: HRGMv2_0721_2_53
Type: pfam
Location: 60817 - 61929 (-)
Gene ID: HRGMv2_0721_2_54
Type: pfam
Location: 61946 - 63127 (-)
Gene ID: HRGMv2_0721_2_55
Type: CAZyme
Location: 63124 - 64989 (-)
Gene ID: HRGMv2_0721_2_56
Type: pfam
Location: 65331 - 67412 (+)
Gene ID: HRGMv2_0721_2_57
Type: TC
Location: 67521 - 69275 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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